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Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities

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dc.creator Gasol, Josep M.
dc.creator Del Giorgio, Paul A.
dc.date 2008-06-25T09:10:33Z
dc.date 2008-06-25T09:10:33Z
dc.date 2000
dc.date.accessioned 2017-01-31T01:48:14Z
dc.date.available 2017-01-31T01:48:14Z
dc.identifier Scientia Marina 64(2): 197-224 (2000)
dc.identifier 0214-8358 (print edition)
dc.identifier 1886-8134 (online edition)
dc.identifier http://hdl.handle.net/10261/5293
dc.identifier 10.3989/scimar.2000.64n2197
dc.identifier.uri http://dspace.mediu.edu.my:8181/xmlui/handle/10261/5293
dc.description Publicación online disponible en: http://www.icm.csic.es/scimar/index.php
dc.description Flow cytometry is rapidly becoming a routine methodology in aquatic microbial ecology. The combination of simple to use bench-top flow cytometers and highly fluorescent nucleic acid stains allows fast and easy determination of microbe abundance in the plankton of lakes and oceans. The different dyes and protocols used to stain and count planktonic bacteria as well as the equipment in use are reviewed, with special attention to some of the problems encountered in daily routine practice such as fixation, staining and absolute counting. One of the main advantages of flow cytometry over epifluorescence microscopy is the ability to obtain cell-specific measurements in large numbers of cells with limited effort. We discuss how this characteristic has been used for differentiating photosynthetic from non-photosynthetic prokaryotes, for measuring bacterial cell size and nucleic acid content, and for estimating the relative activity and physiological state of each cell. We also describe how some of the flow cytometrically obtained data can be used to characterize the role of microbes on carbon cycling in the aquatic environment and we prospect the likely avenues of progress in the study of planktonic prokaryotes through the use of flow cytometry.
dc.description This work has been supported by grants MAS3-CT95- 0016 (MEDEA) and MAS3-CT97-0154 (MIDAS).
dc.description Peer reviewed
dc.format 695030 bytes
dc.format application/pdf
dc.language eng
dc.publisher CSIC - Instituto de Ciencias del Mar (ICM)
dc.relation http://dx.doi.org/10.3989/scimar.2000.64n2197
dc.rights openAccess
dc.subject Heterotrophic and phototrophic bacteria
dc.subject Flow cytometry
dc.subject Counting bacteria
dc.subject Active bacteria
dc.title Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities
dc.type Artículo


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